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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
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2025-04-03 15:29:16, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Gallus gallus breed Huxu chromosome 4.
CP100558.1:312512-312530
CTGGCGCAGCTGAGTTAGACCTAATGTAGG312512ATGTCTGGCTTCCTCCTCCCCACAAAGCAAAGGAGAAAGAGGCAGCAGG
Trachurus trachurus genome assembly, chromosome: 3.
LR991630.1:22269858-22269876
AAGCCCAAAAAATATACTTAAAACTCCACC22269858ATGTCTGGCTTCCTCCTCCACGTCCAACTCCTCCTCAAACTATATAACT
Trachurus trachurus genome assembly, chromosome: 4.
LR991635.1:3234121-3234139
GTCCTGCCCCCTCGTGGCTCCAGCTCCACC3234121ATGTCTGGCTTCCTCCTCCCTCCCAGCCTCCCTCTCTTGTCGAACCGAC
Trachurus trachurus genome assembly, chromosome: 16.
LR991639.1:1114237-1114255
GTCTTGTCCCCTCATGGCTCGAGCTCCACC1114237ATGTCTGGCTTCCTCCTCCACGGCTGACTCCTCTTCCTCCTCCCTCCCA
Pelobates cultripes genome assembly, chromosome: 02.
OW240913.1:266896866-266896884
TTCAACAGCTTCAAAGTCTGCCTCATTCCA266896866ATGTCTGGCTTCCTCCTCCTCTTCCTCTTCCTCCTCAAGACCAGAGCTT
Euphorbia tirucalli mRNA, clone: ETC079B08, 5' end.
BP959759.1:205-223
TCCCTGATCTGGCTAATGCAGGAATCACTC205ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
Euphorbia tirucalli mRNA, clone: ETC115E10, 5' end.
BP959760.1:176-194
TCCCTGATCTGGCTAATGCAGGAATCACTC176ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
Euphorbia tirucalli mRNA, clone: ETC073G09, 5' end.
BP959761.1:176-194
TCCCTGATCTGGCTAATGCAGGAATCACTC176ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
Euphorbia tirucalli mRNA, clone: ETC006E07, 5' end.
BP959762.1:212-230
TCCCTGATCTGGCTAATGCAGGAATCACTC212ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
Euphorbia tirucalli mRNA, clone: ETC023A03, 5' end.
BP959763.1:179-197
TCCCTGATCTGGCTAATGCAGGAATCACTC179ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
Euphorbia tirucalli mRNA, clone: ETC110D01, 5' end.
BP959764.1:170-188
TCCCTGATCTGGCTAATGCAGGAATCACTC170ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
Euphorbia tirucalli mRNA, clone: ETC053A06, 5' end.
BP959765.1:166-184
TCCCTGATCTGGCTAATGCAGGAATCACTC166ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGTTTCACCCGATGGTTACAT
CV03118A1E01.f1 CV03-normalized library Euphorbia esula cDNA clone CV03118A1E01.f1 5, mRNA sequence.
DV137750.1:126-144
TTTCTGATATAGCTAATGCTGGAGTTACCC126ATGTCTGGCTTCCTCCTCCCTCTCAATCTGTTTCACCTCAAGGATACAT
BNSCS4CT_UP_247_A09_23MAY2007_079 Brassica napus BNSCS4CT Brassica napus cDNA 5', mRNA sequence.
EV077359.1:193-211
TCGACGACCTTAGCAACTCTGGAATCACTC193ATGTCTGGCTTCCTCCTCCTTCTCAATCCGTTTCTCCTGAAGGGTACTT
1439386_5_J16_056 PY06 Carica papaya cDNA, mRNA sequence.
EX259196.1:68-86
CTGGATATTGGCTAATGCTGGAATCACTCC68ATGTCTGGCTTCCTCCTCCATCTCACTCTGTTTCACCCCAAGGGTACAT
1442458_5_J16_056 PY06 Carica papaya cDNA, mRNA sequence.
EX262146.1:227-245
TCCCTGATATTGCTAATGCTGGAATCACTC227ATGTCTGGCTTCCTCCTCCATCTCACTCTGTTTCACCCCAAGGGTACAT
1450870_5_I04_008 PY06 Carica papaya cDNA, mRNA sequence.
EX270426.1:467-485
TCCCTGATATTGCTAATGCTGGAATCACTC467ATGTCTGGCTTCCTCCTCCATCTCACTCTGTTTCACCCCAAGGGTACAT
1609620_5_C18_077 PY06 Carica papaya cDNA, mRNA sequence.
EX295931.1:121-139
TCCCTGATATTGCTAATGCTGGAATCACTC121ATGTCTGGCTTCCTCCTCCATCTCACTCTGTTTCACCCCAAGGGTACAT
BN18DYSC_UP_112_A07_7APR2008_063 BN18DYSC Brassica napus cDNA 5', mRNA sequence.
FG562276.1:193-211
TCGACGACCTTAGCAACTCTGGAATCACTC193ATGTCTGGCTTCCTCCTCCTTCTCAATCCGTTTCTCCTGAAGGGTACTT
BN18DYSC_UP_126_F04_31MAR2008_022 BN18DYSC Brassica napus cDNA 5', mRNA sequence.
FG563572.1:197-215
TCGACGACCTTAGCAACTCTGGAATCACTC197ATGTCTGGCTTCCTCCTCCTTCTCAATCCGTTTCTCCTGAAGGGTACTT
Euphorbia tirucalli mRNA, clone: TU001N01-A-014_C19, 5'-end sequence.
HX989057.1:188-206
TCCCTGATCTGGCTAATGCAGGAATCACTC188ATGTCTGGCTTCCTCCTCCCTCTCAGTCTGT
TSA: Nothofagus nervosa isotig01062 mRNA sequence.
JT782621.1:120-138
TTCCTGATCTTGCTACTGCTGGAATCATTC120ATGTCTGGCTTCCTCCTCCCTCTCAATCTGTTGCTCCGCAGGGATACAT
Prunus dulcis DNA, pseudomolecule Pd01.
AP019297.1:32987106-32987124
TTCCCGAACTCTCTAGCTCTGGAATTACCC32987106ATGTCTGGCTTCCTCCTCCTTCTCACTCTAATGGAACTGAGGGTACTTG
Gossypioides kirkii chromosome KI_11.
CP032253.1:14722943-14722961
ATAGATGCAGTACCTTTTCTATTAATCCTG14722943ATGTCTGGCTTCCTCCTCCGAATACCTTTGTTAAAATTAGTTTTGATGC
Euphorbia peplus chromosome 5.
CP110841.1:18491468-18491486
TTTCTGATATAGCTAATGCTGGAGTTACCC18491468ATGTCTGGCTTCCTCCTCCCTCTCAATCTGTTTCACCTCAAGGTCAGTC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:5730713-5730731
TTCCTGACCTCGTTAATGCTGGAATCACTC5730713ATGTCTGGCTTCCTCCTCCCTCTCAATCTGTTGCATCCCAGGGTATCTC
Quercus dentata isolate Qdleaves-2020 chromosome 2.
CP116445.1:6426532-6426550
TTCCTGACCTCGTTAATGCTGGAATCACTC6426532ATGTCTGGCTTCCTCCTCCCTCTCAATCTGTTGCATCCCAGGGTATCTC
Brassica napus cultivar Xiang5A chromosome 2.
CP123877.1:12196680-12196698
TCAACGACCTTAGCAACTCTGGAATCACTC12196680ATGTCTGGCTTCCTCCTCCTTCTCAATCCGTTTCTCCTGAAGGTCCGTC
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome X.
CP130739.1:179696753-179696771
TTGATGATTTGGCTAGAGCTGGAGTTACTC179696753ATGTCTGGCTTCCTCCTCCATCTCATTCTGTTTCACCTCAAGGTAACTT
Spinacia oleracea subsp. turkestanica cultivar PI494751 chromosome Y.
CP130887.1:183185443-183185461
TTGATGATTTGGCTAGAGCTGGAGTTACTC183185443ATGTCTGGCTTCCTCCTCCATCTCATTCTGTTTCACCTCAAGGTAACTT
Swietenia macrophylla isolate HCNGB_00002344 chromosome 2.
CP135570.1:5942728-5942746
TTCCTGATATTGCTAATACTGGTATTACTC5942728ATGTCTGGCTTCCTCCTCCATCTCAGTCTGCTGCATCCCAAGGTAGTTT
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141924.1:39321601-39321619
AATTATACAGTCCAAGATTCTGAACTCATT39321601ATGTCTGGCTTCCTCCTCCATCTTTTCCTTTCCATAAATACAAGTCCAC
Malus hybrid cultivar cultivar Flame chromosome 15.
CP141941.1:42649944-42649962
AATTATACAGTCCAAGATTCTGAACTCATT42649944ATGTCTGGCTTCCTCCTCCATCTTTTCCTTTCCATAAATACAAGTCCAC
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141967.1:38654838-38654856
AATTATACAGTCCAAGATTCTGAACTCATT38654838ATGTCTGGCTTCCTCCTCCATCTTTTCCTTTCCATAAATACAAGTCCAC
Malus hybrid cultivar cultivar Royalty chromosome 15.
CP141984.1:39640634-39640652
AATTATACAGTCCAAGATTCTGAACTCATT39640634ATGTCTGGCTTCCTCCTCCATCTTTTCCTTTCCATAAATACAAGTCCAC
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143372.1:5675222-5675240
TTCTTGAACTTGCTGACTCTGGCATCACCC5675222ATGTCTGGCTTCCTCCTCCTCACACTAATGGAACCGAGGGTATTTACTA
Malus hybrid cultivar cultivar SH6 chromosome 15.
CP143389.1:5411560-5411578
TTCTTGAACTTGCTGACTCTGGCATCACCC5411560ATGTCTGGCTTCCTCCTCCTCCTCACGCTAATGGAACCGAGGGTATTTA
Manihot esculenta alpha-amylase gene, partial cds.
DQ017830.1:95-113
TTCCTGATCTGGCCAATGCTGGAGTTACTC95ATGTCTGGCTTCCTCCTCCTTCTCAGTCAGCCGCACCTCAAGGTAAGTA
Brassica napus genome assembly, chromosome: A01.
HG994355.1:12488901-12488919
TCGACGACCTTAGCAACTCTGGAATCACTC12488901ATGTCTGGCTTCCTCCTCCTTCTCAATCCGTTTCTCCTGAAGGTCCGTC
Fagus sylvatica genome assembly, chromosome: 4.
OU015764.1:31315006-31315024
TTCCTGATCTTGCAAATGCTGGAATCACTC31315006ATGTCTGGCTTCCTCCTCCTTCTCAATCTGTTGCTCCCCAAGGTATGTC
Malus sylvestris genome assembly, chromosome: 15.
OU696517.1:5675561-5675579
TTCTTGAACTTGCTGACTCTGGCATCACCC5675561ATGTCTGGCTTCCTCCTCCTCACGCTAATGGAACCGAGGGTATTTACTA
Malus domestica genome assembly, chromosome: 15.
OU696691.1:5639012-5639030
TTCTTGAACTTGCTGACTCTGGCATCACCC5639012ATGTCTGGCTTCCTCCTCCTCACGCTAATGGAACCAATGATATTTACTA
Malus domestica genome assembly, chromosome: 15.
OU744556.1:5775750-5775768
TTCTTGAACTTGCTGACTCTGGCATCACCC5775750ATGTCTGGCTTCCTCCTCCTCACGCTAATGGAACCAATGATATTTACTA
Malus domestica genome assembly, chromosome: 15.
OU744967.1:5717274-5717292
TTCTTGAACTTGCTGACTCTGGCATCACCC5717274ATGTCTGGCTTCCTCCTCCTCACGCTAATGGAACCAATGGTATTTACTA
Malus domestica genome assembly, chromosome: 15.
OU745005.1:5693509-5693527
TTCTTGAACTTGCTGACTCTGGCATCACCC5693509ATGTCTGGCTTCCTCCTCCTCACGCTAATGGAACCAATGATATTTACTA
Quercus robur genome assembly, chromosome: 2.
OW028766.1:5090424-5090442
TTCCTGACCTCGTTAATGCTGGAATCACTC5090424ATGTCTGGCTTCCTCCTCCCTCTCAATCTGTTGCATCCCAGGGTATCTC
Polygonum aviculare genome assembly, chromosome: 9.
OW204031.1:29494263-29494281
TTGATTCAATTGCACGAGCTGGAATTACTC29494263ATGTCTGGCTTCCTCCTCCTTCCCAATCTGCCTCTCCTCAAGGTTCATA
Chenopodium album genome assembly, chromosome: 9.
OX419216.1:70870911-70870929
TCGACGACTTGGCTAGAGCAGGAGTCACCC70870911ATGTCTGGCTTCCTCCTCCATCTCACTCAGTTTCTCCTCAAGGTATACA
Chenopodium album genome assembly, chromosome: 17.
OX419224.1:49408088-49408106
TCGACGACTTAGCTAGAGCAGGAGTCACCC49408088ATGTCTGGCTTCCTCCTCCATCTCACTCAGTTTCTCCTCAAGGTATACA
Polytrichum commune genome assembly, chromosome: 1.
OX485803.1:51454885-51454903
TTCGACAATGCGCTCAACAATTATTAGGAA51454885ATGTCTGGCTTCCTCCTCCTCGCCAACCCTCTTAGCTCGGCGGGGAAGA
Polytrichum commune genome assembly, chromosome: 7.
OX485809.1:13873453-13873471
TTAACTATGTGCTCAAAACTATGCAAAGAA13873453ATGTCTGGCTTCCTCCTCCTCGCCAGCCCTCTTAGCTCGGCGGGGAAGA
Parietaria judaica genome assembly, chromosome: 11.
OX940870.1:8597967-8597985
TCTCGGTTTTGGCTGATGCCGGAATAACTC8597967ATGTCTGGCTTCCTCCTCCCTCGCAATCGGCTGCCCTGCAAGGTATTCA
Malus x robusta genome assembly, chromosome: 1.
OY720325.1:38868021-38868039
AATTATACAGTCCAAGATTCTGAACTCATT38868021ATGTCTGGCTTCCTCCTCCATCTTTTCCTTTCCATAAATACAAGTCCAC
Crataegus laevigata genome assembly, chromosome: 7.
OY756944.1:26113490-26113508
AGTTATACAGTCCAAGATTCTGAAATCATT26113490ATGTCTGGCTTCCTCCTCCATCTTTTCCTCTCCATAAATACAAGTCCAC
Crataegus laevigata genome assembly, chromosome: 12.
OY756949.1:8983235-8983253
TTCCTGAACTTGCTGACTCTGGCATCACCC8983235ATGTCTGGCTTCCTCCTCCTTCTGACGCTAATGGAACTGAGGGTATGCA
Dryas octopetala genome assembly, chromosome: 7.
OY992838.1:4677866-4677884
TTCCTGAACTTGCGGACTCTGGAATTACCC4677866ATGTCTGGCTTCCTCCTCCTTCTAACTCTAATTCAACTGAGGGTACGCT
Myrica gale genome assembly, chromosome: 4.
OZ005601.1:24152882-24152900
TTTCTGATCTAGCAAATGCCGGAATCACTC24152882ATGTCTGGCTTCCTCCTCCATCTCAATCAGTTGCTCCCCAGGGTATCTC
Lathyrus sativus genome assembly, chromosome: 6.
OZ012740.1:3604847-3604865
TACCTGATATAGCAGATGCTGGTGTTGAAT3604847ATGTCTGGCTTCCTCCTCCCTCCAACTCTCGTGATGACGGTCCTCAAGG
Spilarctia lutea genome assembly, chromosome: Z.
OU696470.1:12311632-12311650
ACTTTGGCGACAGGCGCTCTGCGTGACATT12311632ATGTCTGGCTTCCTCCTCCTCATCTCCCAACGAAGAGATAGCAAGAGAA
Megachile leachella genome assembly, chromosome: 8.
OY756254.1:18123149-18123167
TTCGCTAACGGGTCTAGTTTTTAGCTGCCT18123149ATGTCTGGCTTCCTCCTCCGGTGTTCTTAGCTCCACGGAGTCGCTTCCG

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/ATGTCTGGCTTCCTCCTCC
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : ATGTCTGGCTTCCTCCTCC | format : html | download : | debug : 

0.009 | 0.009 | search_start;
1.508 | 1.499 | search_plus_done; http://172.18.8.135:50400/match?q=ATGTCTGGCTTCCTCCTCC&k=0&no_gap=0&offset=0&limit=50
1.655 | 0.147 | search_minus_done; http://172.18.8.135:50400/match?q=GGAGGAGGAAGCCAGACAT&k=0&no_gap=0&offset=0&limit=0
1.655 | 0.000 | cgi_end;

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